N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 6

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g35950
Nbe.v1.1.chr17g35950.1
Nbe.v1.s00010g35950
Nbe.v1.1.chr17:59235115-59235542
-
VASCULAR-RELATED NAC-DOMAIN 6
NULL
Nbe.v1.1.chr17g41800
Nbe.v1.1.chr17g41800.1
Nbe.v1.s00010g41800
Nbe.v1.1.chr17:37603102-37603380
-
eukaryotic translation initiation factor 4G
eukaryotic translation initiation factor 4G
Nbe.v1.1.chr05g04400
Nbe.v1.1.chr05g04400.1
Nbe.v1.s00030g04400
Nbe.v1.1.chr05:16647833-16651775
+
spliceosomal protein U1A
spliceosomal protein U1A
Nbe.v1.1.chr19g27970
Nbe.v1.1.chr19g27970.1
Nbe.v1.s00060g27970
Nbe.v1.1.chr19:44301690-44306536
-
Sept9 (DUF616)
Protein of unknown function (DUF616)
Nbe.v1.1.chr12g08200
Nbe.v1.1.chr12g08200.1
Nbe.v1.s00070g08200
Nbe.v1.1.chr12:113858431-113862285
-
AGAMOUS-like 13
AGAMOUS-like 13
Nbe.v1.1.chr16g28810
Nbe.v1.1.chr16g28810.1
Nbe.v1.s00180g28810
Nbe.v1.1.chr16:172893806-172895709
+
Copia-like polyprotein/retrotransposon
NULL