N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 3

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr09g03000
Nbe.v1.1.chr09g03000.1
Nbe.v1.s00040g03000
Nbe.v1.1.chr09:138659771-138664941
+
Niben101Scf00980g04007.1
histidine-tRNA ligase
NULL
Nbe.v1.1.chr04g35430
Nbe.v1.1.chr04g35430.1
Nbe.v1.s00130g35430
Nbe.v1.1.chr04:128524-134317
+
Niben101Scf05535g03017.1
histidine-tRNA ligase
NULL
Nbe.v1.1.chr14g14160
Nbe.v1.1.chr14g14160.1
Nbe.v1.s00140g14160
Nbe.v1.1.chr14:83042624-83048931
-
Niben101Scf01274g04009.1
histidine-tRNA ligase
NULL