N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 6

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
71295	Nbe.v1.1.chr05g35330	Nbe.v1.1.chr05g35330.1	Nbe.v1.s00030g35330	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr05:128169224-128171284	+	ATMG00860.1		No description	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
83841	Nbe.v1.1.chr10g40810	Nbe.v1.1.chr10g40810.1	Nbe.v1.s00050g40810	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:139396741-139398326	+	AT2G39380.1	exocyst subunit exo70 family protein H2	exocyst subunit exo70 family protein H2	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
52219	Nbe.v1.1.chr13g38840	Nbe.v1.1.chr13g38840.1	Nbe.v1.s00120g38840	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr13:109423564-109424408	-	AT5G01890.1	Leucine-rich receptor-like protein kinase family protein	Leucine-rich receptor-like protein kinase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
74570	Nbe.v1.1.chr04g27950	Nbe.v1.1.chr04g27950.1	Nbe.v1.s00130g27950	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr04:19612939-19613953	-	AT1G67210.2	Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein	Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
14727	Nbe.v1.1.chr14g21040	Nbe.v1.1.chr14g21040.1	Nbe.v1.s00140g21040	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr14:65756084-65758104	-	AT5G10330.7	histidinol phosphate aminotransferase 1	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
62488	Nbe.v1.1.chr16g28810	Nbe.v1.1.chr16g28810.1	Nbe.v1.s00180g28810	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr16:172893806-172895709	+	AT1G34070.1	Copia-like polyprotein/retrotransposon	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries