N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 10

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g35950
Nbe.v1.1.chr17g35950.1
Nbe.v1.s00010g35950
Nbe.v1.1.chr17:59235115-59235542
-
VASCULAR-RELATED NAC-DOMAIN 6
NULL
Nbe.v1.1.chr17g41800
Nbe.v1.1.chr17g41800.1
Nbe.v1.s00010g41800
Nbe.v1.1.chr17:37603102-37603380
-
eukaryotic translation initiation factor 4G
eukaryotic translation initiation factor 4G
Nbe.v1.1.chr06g11230
Nbe.v1.1.chr06g11230.1
Nbe.v1.s00020g11230
Nbe.v1.1.chr06:114789029-114790581
-
elongation factor Tu C-terminal domain-containing protein
elongation factor Tu C-terminal domain-containing protein
Nbe.v1.1.chr05g35330
Nbe.v1.1.chr05g35330.1
Nbe.v1.s00030g35330
Nbe.v1.1.chr05:128169224-128171284
+
No description
Nbe.v1.1.chr09g12740
Nbe.v1.1.chr09g12740.1
Nbe.v1.s00040g12740
Nbe.v1.1.chr09:105471292-105471695
+
No description
Nbe.v1.1.chr13g38840
Nbe.v1.1.chr13g38840.1
Nbe.v1.s00120g38840
Nbe.v1.1.chr13:109423564-109424408
-
Leucine-rich receptor-like protein kinase family protein
Leucine-rich receptor-like protein kinase family protein
Nbe.v1.1.chr04g27950
Nbe.v1.1.chr04g27950.1
Nbe.v1.s00130g27950
Nbe.v1.1.chr04:19612939-19613953
-
Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr11g25750
Nbe.v1.1.chr11g25750.1
Nbe.v1.s00170g25750
Nbe.v1.1.chr11:56656228-56659344
-
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
NULL
Nbe.v1.1.chr16g28810
Nbe.v1.1.chr16g28810.1
Nbe.v1.s00180g28810
Nbe.v1.1.chr16:172893806-172895709
+
Copia-like polyprotein/retrotransposon
NULL
Nbe.v1.1.chr15g28830
Nbe.v1.1.chr15g28830.1
Nbe.v1.s00190g28830
Nbe.v1.1.chr15:76330679-76331876
+
RING/U-box superfamily protein
RING/U-box superfamily protein