N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 5

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
3321	Nbe.v1.1.chr08g33190	Nbe.v1.1.chr08g33190.1	Nbe.v1.s00080g33190	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr08:120446797-120449107	-	Niben101Scf02077g00005.1	AT1G74830.1	myosin-binding protein%2C putative (Protein of unknown function%2C DUF593)	Protein of unknown function, DUF593	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
55391	Nbe.v1.1.chr18g21380	Nbe.v1.1.chr18g21380.1	Nbe.v1.s00110g21380	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr18:68822230-68824236	-	Niben101Scf02077g00005.1	AT1G74830.1	myosin-binding protein%2C putative (Protein of unknown function%2C DUF593)	Protein of unknown function, DUF593	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
51375	Nbe.v1.1.chr13g30380	Nbe.v1.1.chr13g30380.1	Nbe.v1.s00120g30380	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr13:89144144-89146859	+	Niben101Scf11884g00003.1	AT1G74830.1	myosin-binding protein%2C putative (Protein of unknown function%2C DUF593)	Protein of unknown function, DUF593	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
39258	Nbe.v1.1.chr03g33530	Nbe.v1.1.chr03g33530.1	Nbe.v1.s00150g33530	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:109374942-109375589	+	Niben101Scf11884g00003.1	AT1G74830.1	myosin-binding protein%2C putative (Protein of unknown function%2C DUF593)	Protein of unknown function, DUF593	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
39259	Nbe.v1.1.chr03g33540	Nbe.v1.1.chr03g33540.1	Nbe.v1.s00150g33540	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:109375625-109384368	+	Niben101Scf11884g00003.1	AT1G74830.1	myosin-binding protein%2C putative (Protein of unknown function%2C DUF593)	Protein of unknown function, DUF593	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries