N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 7

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
5323	Nbe.v1.1.chr09g13140	Nbe.v1.1.chr09g13140.1	Nbe.v1.s00040g13140	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr09:103327889-103328188	+	AT1G48570.1	zinc finger (Ran-binding) family protein	zinc finger (Ran-binding) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
12069	Nbe.v1.1.chr12g39140	Nbe.v1.1.chr12g39140.1	Nbe.v1.s00070g39140	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr12:14960367-14960651	+	AT2G19880.1	Nucleotide-diphospho-sugar transferases superfamily protein	Nucleotide-diphospho-sugar transferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
47458	Nbe.v1.1.chr07g28510	Nbe.v1.1.chr07g28510.1	Nbe.v1.s00100g28510	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr07:31807524-31807850	+	AT2G19220.1	Myb/SANT-like DNA-binding domain protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
51914	Nbe.v1.1.chr13g35770	Nbe.v1.1.chr13g35770.1	Nbe.v1.s00120g35770	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr13:101324895-101325143	+	AT2G18360.1	alpha/beta-Hydrolases superfamily protein	alpha/beta-Hydrolases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
36832	Nbe.v1.1.chr03g09170	Nbe.v1.1.chr03g09170.1	Nbe.v1.s00150g09170	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:29995238-29995531	-	AT5G56050.1	late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
64364	Nbe.v1.1.chr15g16060	Nbe.v1.1.chr15g16060.1	Nbe.v1.s00190g16060	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr15:125991599-125993178	+	AT3G10030.2	aspartate/glutamate/uridylate kinase family protein	aspartate/glutamate/uridylate kinase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
65664	Nbe.v1.1.chr15g29040	Nbe.v1.1.chr15g29040.1	Nbe.v1.s00190g29040	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr15:75311644-75312045	+	AT3G58050.1	hypothetical protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries