N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 5

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
42979	Nbe.v1.1.chr06g26570	Nbe.v1.1.chr06g26570.1	Nbe.v1.s00020g26570	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr06:57838710-57842520	-	Niben101Scf03061g00007.1	AT5G46340.2	O-acetyltransferase family protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
42980	Nbe.v1.1.chr06g26580	Nbe.v1.1.chr06g26580.1	Nbe.v1.s00020g26580	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr06:57836211-57837769	-	Niben101Scf03061g00007.1	AT2G34410.3	O-acetyltransferase family protein	O-acetyltransferase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
20838	Nbe.v1.1.chr19g39830	Nbe.v1.1.chr19g39830.1	Nbe.v1.s00060g39830	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:15427520-15433972	+	Niben101Scf01785g07003.1	AT2G34410.2	O-acetyltransferase family protein	O-acetyltransferase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
76515	Nbe.v1.1.chr02g11970	Nbe.v1.1.chr02g11970.1	Nbe.v1.s00090g11970	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr02:117312908-117319350	+	Niben101Scf01785g07003.1	AT2G34410.2	O-acetyltransferase family protein	O-acetyltransferase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
56728	Nbe.v1.1.chr18g34770	Nbe.v1.1.chr18g34770.1	Nbe.v1.s00110g34770	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr18:25553710-25567259	-	Niben101Scf03061g00007.1	AT5G46340.1	O-acetyltransferase family protein	O-acetyltransferase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries