N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 7

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
19675	Nbe.v1.1.chr19g28210	Nbe.v1.1.chr19g28210.1	Nbe.v1.s00060g28210	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:43878964-43882583	-	Niben101Scf04133g01003.1	AT3G29060.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
19679	Nbe.v1.1.chr19g28250	Nbe.v1.1.chr19g28250.1	Nbe.v1.s00060g28250	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:43742562-43743015	-	Niben101Scf06457g00017.1	AT2G03240.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
19680	Nbe.v1.1.chr19g28260	Nbe.v1.1.chr19g28260.1	Nbe.v1.s00060g28260	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:43741592-43742546	-	Niben101Scf06457g00017.1	AT3G29060.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
75654	Nbe.v1.1.chr02g03320	Nbe.v1.1.chr02g03320.1	Nbe.v1.s00090g03320	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr02:136282542-136287441	-	Niben101Scf04133g01003.1	AT3G29060.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
75661	Nbe.v1.1.chr02g03390	Nbe.v1.1.chr02g03390.1	Nbe.v1.s00090g03390	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr02:136123616-136128050	+	Niben101Scf04133g01003.1	AT3G29060.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
73952	Nbe.v1.1.chr04g21710	Nbe.v1.1.chr04g21710.1	Nbe.v1.s00130g21710	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr04:42155712-42160345	-	Niben101Scf02429g07037.1	AT3G29060.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
13180	Nbe.v1.1.chr14g05530	Nbe.v1.1.chr14g05530.1	Nbe.v1.s00140g05530	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr14:113361036-113366261	-	Niben101Scf02429g07037.1	AT3G29060.1	EXS (ERD1/XPR1/SYG1) family protein	EXS (ERD1/XPR1/SYG1) family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries