N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 10

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g29440
Nbe.v1.1.chr17g29440.1
Nbe.v1.s00010g29440
Nbe.v1.1.chr17:86266355-86266801
+
cold shock domain protein 1
NULL
Nbe.v1.1.chr17g35950
Nbe.v1.1.chr17g35950.1
Nbe.v1.s00010g35950
Nbe.v1.1.chr17:59235115-59235542
-
VASCULAR-RELATED NAC-DOMAIN 6
NULL
Nbe.v1.1.chr05g04400
Nbe.v1.1.chr05g04400.1
Nbe.v1.s00030g04400
Nbe.v1.1.chr05:16647833-16651775
+
spliceosomal protein U1A
spliceosomal protein U1A
Nbe.v1.1.chr05g32700
Nbe.v1.1.chr05g32700.1
Nbe.v1.s00030g32700
Nbe.v1.1.chr05:118134844-118137330
+
No description
Nbe.v1.1.chr05g35320
Nbe.v1.1.chr05g35320.1
Nbe.v1.s00030g35320
Nbe.v1.1.chr05:128168250-128168837
+
cold shock domain protein 3
cold shock domain protein 3
Nbe.v1.1.chr02g27420
Nbe.v1.1.chr02g27420.1
Nbe.v1.s00090g27420
Nbe.v1.1.chr02:73934080-73934367
-
UbiA prenyltransferase family protein
UbiA prenyltransferase family protein
Nbe.v1.1.chr18g04730
Nbe.v1.1.chr18g04730.1
Nbe.v1.s00110g04730
Nbe.v1.1.chr18:126936267-126936926
-
F-box family protein
F-box family protein
Nbe.v1.1.chr01g38530
Nbe.v1.1.chr01g38530.1
Nbe.v1.s00160g38530
Nbe.v1.1.chr01:16437639-16441623
+
cold shock domain protein 1
NULL
Nbe.v1.1.chr15g21220
Nbe.v1.1.chr15g21220.1
Nbe.v1.s00190g21220
Nbe.v1.1.chr15:106258354-106261178
+
No description
Nbe.v1.1.chr16g37630
Nbe.v1.1.chr16g37630.1
Nbe.v1.s00200g06220
Nbe.v1.1.chr16:15875256-15877754
-
SET domain group 21
SET domain group 21