N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 8

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
73879	Nbe.v1.1.chr04g20990	Nbe.v1.1.chr04g20990.1	Nbe.v1.s00130g20990	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr04:44828277-44829863	+	Niben101Scf01942g05016.1	AT1G11260.1	sugar transporter 1	sugar transporter 1	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
73883	Nbe.v1.1.chr04g21030	Nbe.v1.1.chr04g21030.1	Nbe.v1.s00130g21030	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr04:44780627-44782195	-	Niben101Scf01942g05016.1	AT1G11260.1	sugar transporter 1	sugar transporter 1	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
13052	Nbe.v1.1.chr14g04220	Nbe.v1.1.chr14g04220.1	Nbe.v1.s00140g04220	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr14:116999120-117000697	+	Niben101Scf01942g05016.1	AT1G11260.1	sugar transporter 1	sugar transporter 1	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
13065	Nbe.v1.1.chr14g04350	Nbe.v1.1.chr14g04350.1	Nbe.v1.s00140g04350	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr14:116698008-116698921	-	Niben101Scf08308g04014.1	AT4G21480.1	sugar transporter protein 12	sugar transporter protein 12	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
13068	Nbe.v1.1.chr14g04380	Nbe.v1.1.chr14g04380.1	Nbe.v1.s00140g04380	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr14:116683444-116686960	-	Niben101Scf01942g05016.1	AT1G11260.1	sugar transporter 1	sugar transporter 1	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
36656	Nbe.v1.1.chr03g07410	Nbe.v1.1.chr03g07410.1	Nbe.v1.s00150g07410	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:25613815-25614048	-	Niben101Scf03929g05001.1	AT4G21480.1	sugar transporter protein 12	sugar transporter protein 12	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
27911	Nbe.v1.1.chr01g20310	Nbe.v1.1.chr01g20310.1	Nbe.v1.s00160g20310	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr01:61246226-61247794	+	Niben101Scf01942g05016.1	AT1G11260.1	sugar transporter 1	sugar transporter 1	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
63508	Nbe.v1.1.chr15g07470	Nbe.v1.1.chr15g07470.1	Nbe.v1.s00190g07470	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr15:152617408-152617828	+	Niben101Scf08308g04014.1	AT1G48650.1	DEA(D/H)-box RNA helicase family protein	DEA(D/H)-box RNA helicase family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries