N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 10

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr09g38080
Nbe.v1.1.chr09g38080.1
Nbe.v1.s00040g38080
Nbe.v1.1.chr09:19334387-19334815
+
Niben101Scf04528g13005.1
sugar transporter protein 12
sugar transporter protein 12
Nbe.v1.1.chr04g20990
Nbe.v1.1.chr04g20990.1
Nbe.v1.s00130g20990
Nbe.v1.1.chr04:44828277-44829863
+
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr04g21030
Nbe.v1.1.chr04g21030.1
Nbe.v1.s00130g21030
Nbe.v1.1.chr04:44780627-44782195
-
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr14g04220
Nbe.v1.1.chr14g04220.1
Nbe.v1.s00140g04220
Nbe.v1.1.chr14:116999120-117000697
+
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr14g04350
Nbe.v1.1.chr14g04350.1
Nbe.v1.s00140g04350
Nbe.v1.1.chr14:116698008-116698921
-
Niben101Scf08308g04014.1
sugar transporter protein 12
sugar transporter protein 12
Nbe.v1.1.chr14g04360
Nbe.v1.1.chr14g04360.1
Nbe.v1.s00140g04360
Nbe.v1.1.chr14:116697392-116697991
-
Niben101Scf08308g04013.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr14g04380
Nbe.v1.1.chr14g04380.1
Nbe.v1.s00140g04380
Nbe.v1.1.chr14:116683444-116686960
-
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr03g07400
Nbe.v1.1.chr03g07400.1
Nbe.v1.s00150g07400
Nbe.v1.1.chr03:25611749-25613527
-
Niben101Scf03929g05002.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr01g20310
Nbe.v1.1.chr01g20310.1
Nbe.v1.s00160g20310
Nbe.v1.1.chr01:61246226-61247794
+
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr15g07480
Nbe.v1.1.chr15g07480.1
Nbe.v1.s00190g07480
Nbe.v1.1.chr15:152602545-152602829
+
Niben101Scf17046g03007.1
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain