N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 10

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g44020
Nbe.v1.1.chr17g44020.1
Nbe.v1.s00010g44020
Nbe.v1.1.chr17:29881570-29892617
+
Niben101Scf04835g00001.1
E3 ubiquitin ligase
NULL
Nbe.v1.1.chr04g20990
Nbe.v1.1.chr04g20990.1
Nbe.v1.s00130g20990
Nbe.v1.1.chr04:44828277-44829863
+
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr04g21030
Nbe.v1.1.chr04g21030.1
Nbe.v1.s00130g21030
Nbe.v1.1.chr04:44780627-44782195
-
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr14g04220
Nbe.v1.1.chr14g04220.1
Nbe.v1.s00140g04220
Nbe.v1.1.chr14:116999120-117000697
+
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr14g04360
Nbe.v1.1.chr14g04360.1
Nbe.v1.s00140g04360
Nbe.v1.1.chr14:116697392-116697991
-
Niben101Scf08308g04013.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr14g04380
Nbe.v1.1.chr14g04380.1
Nbe.v1.s00140g04380
Nbe.v1.1.chr14:116683444-116686960
-
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr03g07400
Nbe.v1.1.chr03g07400.1
Nbe.v1.s00150g07400
Nbe.v1.1.chr03:25611749-25613527
-
Niben101Scf03929g05002.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr03g14960
Nbe.v1.1.chr03g14960.1
Nbe.v1.s00150g14960
Nbe.v1.1.chr03:54510445-54517481
-
Niben101Scf04835g00001.1
E3 ubiquitin ligase
NULL
Nbe.v1.1.chr01g20310
Nbe.v1.1.chr01g20310.1
Nbe.v1.s00160g20310
Nbe.v1.1.chr01:61246226-61247794
+
Niben101Scf01942g05016.1
sugar transporter 1
sugar transporter 1
Nbe.v1.1.chr15g07480
Nbe.v1.1.chr15g07480.1
Nbe.v1.s00190g07480
Nbe.v1.1.chr15:152602545-152602829
+
Niben101Scf17046g03007.1
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain