N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 7

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
68635	Nbe.v1.1.chr05g08710	Nbe.v1.1.chr05g08710.1	Nbe.v1.s00030g08710	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr05:30132896-30133243	-	AT3G58650.1	GPI-anchored adhesin-like protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
12069	Nbe.v1.1.chr12g39140	Nbe.v1.1.chr12g39140.1	Nbe.v1.s00070g39140	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr12:14960367-14960651	+	AT2G19880.1	Nucleotide-diphospho-sugar transferases superfamily protein	Nucleotide-diphospho-sugar transferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
36832	Nbe.v1.1.chr03g09170	Nbe.v1.1.chr03g09170.1	Nbe.v1.s00150g09170	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:29995238-29995531	-	AT5G56050.1	late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
38550	Nbe.v1.1.chr03g26410	Nbe.v1.1.chr03g26410.1	Nbe.v1.s00150g26410	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:92566393-92566629	-	AT2G20000.2	CDC27 family protein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
27649	Nbe.v1.1.chr01g17690	Nbe.v1.1.chr01g17690.1	Nbe.v1.s00160g17690	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr01:69517810-69518181	+	AT1G07330.2	dentin sialophosphoprotein	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
30132	Nbe.v1.1.chr01g42560	Nbe.v1.1.chr01g42560.1	Nbe.v1.s00160g42560	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr01:7628800-7629138	+	AT4G34950.1	Major facilitator superfamily protein	Major facilitator superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
25215	Nbe.v1.1.chr11g37870	Nbe.v1.1.chr11g37870.1	Nbe.v1.s00170g37870	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr11:16600097-16600405	+	AT4G31570.7	nucleoporin	NULL	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries