N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 8

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g29440
Nbe.v1.1.chr17g29440.1
Nbe.v1.s00010g29440
Nbe.v1.1.chr17:86266355-86266801
+
cold shock domain protein 1
NULL
Nbe.v1.1.chr06g20760
Nbe.v1.1.chr06g20760.1
Nbe.v1.s00020g20760
Nbe.v1.1.chr06:79861787-79863173
+
CELLULOSE SYNTHASE INTERACTIVE 2
NULL
Nbe.v1.1.chr06g30190
Nbe.v1.1.chr06g30190.1
Nbe.v1.s00020g30190
Nbe.v1.1.chr06:44950379-44951951
-
No description
Nbe.v1.1.chr05g04400
Nbe.v1.1.chr05g04400.1
Nbe.v1.s00030g04400
Nbe.v1.1.chr05:16647833-16651775
+
spliceosomal protein U1A
spliceosomal protein U1A
Nbe.v1.1.chr05g35320
Nbe.v1.1.chr05g35320.1
Nbe.v1.s00030g35320
Nbe.v1.1.chr05:128168250-128168837
+
cold shock domain protein 3
cold shock domain protein 3
Nbe.v1.1.chr10g40810
Nbe.v1.1.chr10g40810.1
Nbe.v1.s00050g40810
Nbe.v1.1.chr10:139396741-139398326
+
exocyst subunit exo70 family protein H2
exocyst subunit exo70 family protein H2
Nbe.v1.1.chr01g12820
Nbe.v1.1.chr01g12820.1
Nbe.v1.s00160g12820
Nbe.v1.1.chr01:86713268-86714953
+
Protein kinase family protein
Protein kinase family protein
Nbe.v1.1.chr01g20720
Nbe.v1.1.chr01g20720.1
Nbe.v1.s00160g20720
Nbe.v1.1.chr01:60053425-60054721
-
Niben101Scf04557g03009.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein