BLASTN 2.15.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Nbe_v1.1_scf Genome Blast Database
           1,666 sequences; 2,926,155,461 total letters



Query= Nbe.v1.1.chr08g00020

Length=234
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Nbe.v1.1.chr08                                                        279     3e-73


>Nbe.v1.1.chr08
Length=143789764

 Score = 279 bits (151),  Expect = 3e-73
 Identities = 151/151 (100%), Gaps = 0/151 (0%)
 Strand=Plus/Minus

Query  1      ATGATTGGGCAGCTCTTGGGCGAGGTAGATCAAGTTCGGGATGATTGTCATCAGTGGGAG  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  92320  ATGATTGGGCAGCTCTTGGGCGAGGTAGATCAAGTTCGGGATGATTGTCATCAGTGGGAG  92261

Query  61     AAGAACATGGATCAACTTGCCGCCGATAAGAAAGCAGTTGTGGCTCAACTGGCCTCAATT  120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  92260  AAGAACATGGATCAACTTGCCGCCGATAAGAAAGCAGTTGTGGCTCAACTGGCCTCAATT  92201

Query  121    GAAGCTCATCTCCGAGGTGTTGAAGCGAAGG  151
              |||||||||||||||||||||||||||||||
Sbjct  92200  GAAGCTCATCTCCGAGGTGTTGAAGCGAAGG  92170


 Score = 159 bits (86),  Expect = 4e-37
 Identities = 94/97 (97%), Gaps = 3/97 (3%)
 Strand=Plus/Minus

Query  141    TGAAGC-G-A-AGGCTAAGGCTGAAGCTGTACAGGATAAGGCCGGAGCTGAGAAGATGAA  197
              |||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  92111  TGAAGCTGCACAGGCTAAGGCTGAAGCTGTACAGGATAAGGCCGGAGCTGAGAAGATGAA  92052

Query  198    GGCTACAGCTGATAAATCCATTGCTATATACAAATGA  234
              |||||||||||||||||||||||||||||||||||||
Sbjct  92051  GGCTACAGCTGATAAATCCATTGCTATATACAAATGA  92015



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 602778415478


  Database: Nbe_v1.1_scf Genome Blast Database
    Posted date:  Dec 5, 2024  9:41 AM
  Number of letters in database: 2,926,155,461
  Number of sequences in database:  1,666



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5