TBLASTX 2.15.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Niben101 cDNA Blast Database
           57,140 sequences; 82,582,885 total letters



Query= Nbe.v1.1.chr08g00050

Length=351
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value  N

Niben101Scf14009g02003.1                                              34.1    0.20   1
Niben101Scf02413g00004.1                                              24.4    2.2    2
Niben101Scf36099g00004.1                                              24.0    3.2    2
Niben101Scf02969g00003.1                                              29.5    4.9    1
Niben101Scf01119g00006.1                                              29.0    6.6    1
Niben101Scf03045g13003.1                                              28.6    9.1    1
Niben101Scf17290g01006.1                                              28.6    9.1    1


>Niben101Scf14009g02003.1
Length=12374

 Score = 34.1 bits (68),  Expect = 0.20
 Identities = 14/59 (24%), Positives = 27/59 (46%), Gaps = 0/59 (0%)
 Frame = +2/+1

Query  65    RQSKSNTWLRPFNSTWLRSSLLTVNPMSTTVERKTQRESKSTIWLRPFNSTWIRSSI*N  241
             R  K+  W R   + WLR +L         + ++ +R  K+ +W R   +  +R ++ N
Sbjct  6355  RNLKNQLWKRNLKNQWLRRNLKNQQLRKKMMNQQCKRNLKNQLWKRNLKNQQLRRNLTN  6531


>Niben101Scf02413g00004.1
Length=396

 Score = 24.4 bits (47),  Expect(2) = 2.2
 Identities = 9/19 (47%), Positives = 14/19 (74%), Gaps = 0/19 (0%)
 Frame = +3/+1

Query  24   QSTQCKL*QNERLDDSQSQ  80
            QS+QC + +NE L+D  S+
Sbjct  76   QSSQCSVVENEVLEDEVSE  132


 Score = 22.1 bits (42),  Expect(2) = 2.2
 Identities = 6/17 (35%), Positives = 11/17 (65%), Gaps = 0/17 (0%)
 Frame = +2/+1

Query  95   PFNSTWLRSSLLTVNPM  145
            P  +TW R + +T+N +
Sbjct  280  PTKTTWKRKAAITINKL  330


>Niben101Scf36099g00004.1
Length=3352

 Score = 24.0 bits (46),  Expect(2) = 3.2
 Identities = 10/22 (45%), Positives = 12/22 (55%), Gaps = 0/22 (0%)
 Frame = +3/+3

Query  240   TAKVIATNSRPNVDYGRTKDST  305
             T +V    SRPN DY +   ST
Sbjct  2373  TLEVGPAGSRPNGDYSKNSGST  2438


 Score = 23.1 bits (44),  Expect(2) = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (65%), Gaps = 0/17 (0%)
 Frame = +1/+3

Query  127   ANSQPNVDYGRTKDSTR  177
             A S+PN DY +   ST+
Sbjct  2304  AGSRPNGDYSKNSGSTK  2354


>Niben101Scf02969g00003.1
Length=1629

 Score = 29.5 bits (58),  Expect = 4.9
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
 Frame = +1/+1

Query  7    KSITANNRPNVNYSRTKDSTTVKVKHMAKAIQFYMAKVIAANSQPNVDYGR  159
            K IT N RP        + TT+++  + + + FY     A   + N+D  R
Sbjct  655  KDITGNPRPFRRLRTACEKTTIEIDSLYEGVDFYSTITRARFEELNMDLFR  807


>Niben101Scf01119g00006.1
Length=1974

 Score = 29.0 bits (57),  Expect = 6.6
 Identities = 12/27 (44%), Positives = 17/27 (63%), Gaps = 0/27 (0%)
 Frame = +2/-2

Query  134   VNPMSTTVERKTQRESKSTIWLRPFNS  214
             VNP++ T  RKT R+ +  I   P+NS
Sbjct  1457  VNPLAYTRARKTDRQRRLFIVTAPYNS  1377


>Niben101Scf03045g13003.1
Length=1635

 Score = 28.6 bits (56),  Expect = 9.1
 Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 0/16 (0%)
 Frame = +2/-3

Query  188   TIWLRPFNSTWIRSSI  235
             T+WL P+  +W+R SI
Sbjct  1498  TLWLNPYIKSWVRHSI  1451


>Niben101Scf17290g01006.1
Length=596

 Score = 28.6 bits (56),  Expect = 9.1
 Identities = 15/40 (38%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
 Frame = +2/+1

Query  101  NSTWLRSSLLTVNPMSTTVERKTQRESKSTIWLRPFNSTW  220
            NST LRS+ L V  ++TT   + QR S+ + +    N  W
Sbjct  466  NSTELRSASLDVIAIATTSANEHQRLSEFSFFSCVINKKW  585



Lambda      K        H
   0.318    0.134    0.401 


Effective search space used: 1825983164


  Database: Niben101 cDNA Blast Database
    Posted date:  Dec 5, 2024  9:47 AM
  Number of letters in database: 82,582,885
  Number of sequences in database:  57,140



Matrix: BLOSUM62
Neighboring words threshold: 13
Window for multiple hits: 40