BLASTN 2.15.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Nbe_v1.1_cds Blast Database
           84,570 sequences; 75,458,201 total letters



Query= Nbe.v1.1.chr09g30420

Length=324
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Nbe.v1.1.chr09g30420                                                  599     8e-171
Nbe.v1.1.chr15g42900                                                  326     1e-88 
Nbe.v1.1.chr04g06280                                                  180     1e-44 


>Nbe.v1.1.chr09g30420
Length=324

 Score = 599 bits (324),  Expect = 8e-171
 Identities = 324/324 (100%), Gaps = 0/324 (0%)
 Strand=Plus/Plus

Query  1    ATGAGCGGTTGCACCAAAGCAGGAACAGGTAAACGTAACTTATACGGGGCAGCCAGAGAA  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGAGCGGTTGCACCAAAGCAGGAACAGGTAAACGTAACTTATACGGGGCAGCCAGAGAA  60

Query  61   CCTGTCGTGGTTGTGGAAGGTGTCCGCATAGAGCCTGTTATTGTAAAGCCAGTGATCCAT  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   CCTGTCGTGGTTGTGGAAGGTGTCCGCATAGAGCCTGTTATTGTAAAGCCAGTGATCCAT  120

Query  121  CCACCAATCATCAGCAACAAAGCCTTTCCTTGGAGATATGAGCAGGAAATAGTGATGTGC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  CCACCAATCATCAGCAACAAAGCCTTTCCTTGGAGATATGAGCAGGAAATAGTGATGTGC  180

Query  181  AAAGGGAAAGAAGTTAGAAAGGAAGTGTGTGAGGCACGTGGTTTAACTCGTTTAGGAAGG  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  AAAGGGAAAGAAGTTAGAAAGGAAGTGTGTGAGGCACGTGGTTTAACTCGTTTAGGAAGG  240

Query  241  TACTTTGCTCCAGAAGAATTGAGAAAGGGAAGAATCTCTAAAGATAATCCAAAACTAGTG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  TACTTTGCTCCAGAAGAATTGAGAAAGGGAAGAATCTCTAAAGATAATCCAAAACTAGTG  300

Query  301  AACAAGGCTGTGTCAGAAGAATAG  324
            ||||||||||||||||||||||||
Sbjct  301  AACAAGGCTGTGTCAGAAGAATAG  324


>Nbe.v1.1.chr15g42900
Length=1449

 Score = 326 bits (176),  Expect = 1e-88
 Identities = 272/319 (85%), Gaps = 3/319 (1%)
 Strand=Plus/Plus

Query  5     GCGGTTGCACCAAAGCAGGAACAGGTAAACGTAAC-TTATACGGGGCAGCCAGAGAACCT  63
             |||||| | |||||||||||||||| |||  ||||  || | |||| ||| |||||||||
Sbjct  706   GCGGTTACGCCAAAGCAGGAACAGGCAAAACTAACAGTACATGGGGTAGCTAGAGAACCT  765

Query  64    GTCGTGGTTGTGGAAGGTGTCCGCATAGAGCCTGTTATTGTAAAGCCAGTGATCCATCCA  123
             |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||
Sbjct  766   GTCGTGGTTGTGGAAGGTGTTCGCATAGAGCCAGTTATTGTAAAACCAGTGATCCAGCCA  825

Query  124   CCAATCATCAGCAACAAAGCCTTTCCTTGGAGATATGAGCAGGAAATAGTGATGTGCAAA  183
             |||||||||| |||||||| | ||||||||||||||||||| | ||||||||||| ||| 
Sbjct  826   CCAATCATCAACAACAAAGTCGTTCCTTGGAGATATGAGCAAGCAATAGTGATGTACAAG  885

Query  184   GGGAAAGAAGTTAGAAAGG-AAGTGTGTGAGGCACGTGGTTTAACTCGTTTAGGAAGGTA  242
             || |||||||| | |  || |||||||||||||| | ||||||||||| |||||||||||
Sbjct  886   GGAAAAGAAGT-AAAGGGGAAAGTGTGTGAGGCATGGGGTTTAACTCGGTTAGGAAGGTA  944

Query  243   CTTTGCTCCAGAAGAATTGAGAAAGGGAAGAATCTCTAAAGATAATCCAAAACTAGTGAA  302
             |||||| ||  |||||||||  ||||| ||||||||||||||||  ||| ||| ||| ||
Sbjct  945   CTTTGCCCCGAAAGAATTGAAGAAGGGCAGAATCTCTAAAGATAGACCAGAACCAGTAAA  1004

Query  303   CAAGGCTGTGTCAGAAGAA  321
              || |  ||| ||||||||
Sbjct  1005  GAAAGTGGTGGCAGAAGAA  1023


>Nbe.v1.1.chr04g06280
Length=285

 Score = 180 bits (97),  Expect = 1e-44
 Identities = 136/155 (88%), Gaps = 1/155 (1%)
 Strand=Plus/Plus

Query  9    TTGCACCAAAGCAGGAACAGGTAAACGTAAC-TTATACGGGGCAGCCAGAGAACCTGTCG  67
            |||| |||||||||||||| | ||  |||||  || | |||||||| |||||||||||||
Sbjct  128  TTGCGCCAAAGCAGGAACATGCAAGAGTAACAGTACATGGGGCAGCTAGAGAACCTGTCG  187

Query  68   TGGTTGTGGAAGGTGTCCGCATAGAGCCTGTTATTGTAAAGCCAGTGATCCATCCACCAA  127
            |||||||||||||||| ||||| ||||| ||||||||||| ||||||| ||| |||||||
Sbjct  188  TGGTTGTGGAAGGTGTTCGCATGGAGCCAGTTATTGTAAAACCAGTGAGCCAACCACCAA  247

Query  128  TCATCAGCAACAAAGCCTTTCCTTGGAGATATGAG  162
            |||||| |||||||||  |||||||||||||||||
Sbjct  248  TCATCAACAACAAAGCTGTTCCTTGGAGATATGAG  282



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 22028556300


  Database: Nbe_v1.1_cds Blast Database
    Posted date:  Dec 5, 2024  9:40 AM
  Number of letters in database: 75,458,201
  Number of sequences in database:  84,570



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5