BLASTN 2.15.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Nbe_v1.1_scf Genome Blast Database 1,666 sequences; 2,926,155,461 total letters Query= Nbe.v1.1.chr07g16430 Length=348 Score E Sequences producing significant alignments: (Bits) Value Nbe.v1.1.chr07 294 2e-77 Nbe.v1.1.chr17 254 3e-65 Nbe.v1.1.chr13 189 9e-46 Nbe.v1.1.chr03 169 1e-39 >Nbe.v1.1.chr07 Length=141754421 Score = 294 bits (159), Expect = 2e-77 Identities = 162/163 (99%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 41 GCCAACAAGTGGTTGTGGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTA 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75405855 GCCAACAAGTGGTTGTGGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTA 75405914 Query 101 ACTCCCTCCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATG 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75405915 ACTCCCTCCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATG 75405974 Query 161 AAAATTGCCAGAAAAGCAAGATTTTCTTTATTGCTTGGTCACC 203 ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 75405975 AAAATTGCCAGAAAAGCAAGATTTTCTTTATTGCTTGGT-ACC 75406016 Score = 281 bits (152), Expect = 1e-73 Identities = 152/152 (100%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 197 GGTCACCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCAAGCTCAAAGGATAGAT 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75406129 GGTCACCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCAAGCTCAAAGGATAGAT 75406188 Query 257 TCAAGAGAGAATTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAAATGA 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75406189 TCAAGAGAGAATTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAAATGA 75406248 Query 317 GCTTTGACATTATAAAGTCACGAGCACTTTGA 348 |||||||||||||||||||||||||||||||| Sbjct 75406249 GCTTTGACATTATAAAGTCACGAGCACTTTGA 75406280 Score = 73.1 bits (39), Expect = 9e-11 Identities = 39/39 (100%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 3 GGCAAATGCTGCGTCTGGAATGGCTATGCTAGACGAGTG 41 ||||||||||||||||||||||||||||||||||||||| Sbjct 75405752 GGCAAATGCTGCGTCTGGAATGGCTATGCTAGACGAGTG 75405790 >Nbe.v1.1.chr17 Length=184452736 Score = 254 bits (137), Expect = 3e-65 Identities = 147/152 (97%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 197 GGTCACCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCAAGCTCAAAGGATAGAT 256 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 85303827 GGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCGAGTTCAAAGGATAGAT 85303886 Query 257 TCAAGAGAGAATTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAAATGA 316 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 85303887 TCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGA 85303946 Query 317 GCTTTGACATTATAAAGTCACGAGCACTTTGA 348 |||||||||||||||||||||||||||||||| Sbjct 85303947 GCTTTGACATTATAAAGTCACGAGCACTTTGA 85303978 Score = 233 bits (126), Expect = 4e-59 Identities = 151/163 (93%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 41 GCCAACAAGTGGTTGTGGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTA 100 ||||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| | Sbjct 85303439 GCCAACAAGTGGTTGTGGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCA 85303498 Query 101 ACTCCCTCCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATG 160 |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 85303499 ACTCTCTGCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTG 85303558 Query 161 AAAATTGCCAGAAAAGCAAGATTTTCTTTATTGCTTGGTCACC 203 |||||||||||||||||||||||||||| |||||||||| ||| Sbjct 85303559 AAAATTGCCAGAAAAGCAAGATTTTCTTCATTGCTTGGT-ACC 85303600 >Nbe.v1.1.chr13 Length=141292916 Score = 189 bits (102), Expect = 9e-46 Identities = 136/153 (89%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 47 AAGTGGTTGTGGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTAACTCCC 106 ||||||| || ||||||||||| | ||||| |||| |||||| |||||| ||||||| | Sbjct 62868445 AAGTGGTGGTAGAGAAGCTTGGCAGCCCTGAAGAAAGCTATGAAGATTTCTCTAACTCTC 62868386 Query 107 TCCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATGAAAATT 166 | ||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||||| Sbjct 62868385 TGCCTGCAGATGAATGTCGCTATGCTGTCTTTGATTTAGACTTCATAACTAATGAAAATT 62868326 Query 167 GCCAGAAAAGCAAGATTTTCTTTATTGCTTGGT 199 |||||||||||||||||||||| |||||||||| Sbjct 62868325 GCCAGAAAAGCAAGATTTTCTTCATTGCTTGGT 62868293 >Nbe.v1.1.chr03 Length=132617964 Score = 169 bits (91), Expect = 1e-39 Identities = 121/136 (89%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 64 CTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTAACTCCCTCCCTGCCGATGAGTGC 123 ||||| || ||||| |||| |||||| |||||| ||||||| || ||||| ||||| || Sbjct 86984959 CTTGGCAACCCTGAAGAAAGCTATGAAGATTTCTCTAACTCTCTGCCTGCAGATGAATGT 86984900 Query 124 CGCTATGCTGTCTTTGATTTCGACTTTATAACTAATGAAAATTGCCAGAAAAGCAAGATT 183 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 86984899 CGCTATGCTGTCTTTGATTTAGACTTCATAACTAATGAAAATTGCCAGAAAAGCAAGATT 86984840 Query 184 TTCTTTATTGCTTGGT 199 ||||| ||||||| || Sbjct 86984839 TTCTTCATTGCTTTGT 86984824 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 933428179893 Database: Nbe_v1.1_scf Genome Blast Database Posted date: Dec 5, 2024 9:41 AM Number of letters in database: 2,926,155,461 Number of sequences in database: 1,666 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5