BLASTN 2.15.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Nbe_v1.1_cds Blast Database
           84,570 sequences; 75,458,201 total letters



Query= Nbe.v1.1.chr07g16430

Length=348
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Nbe.v1.1.chr07g16430                                                  643     0.0   
Nbe.v1.1.chr17g29780                                                  481     3e-135


>Nbe.v1.1.chr07g16430
Length=348

 Score = 643 bits (348),  Expect = 0.0
 Identities = 348/348 (100%), Gaps = 0/348 (0%)
 Strand=Plus/Plus

Query  1    ATGGCAAATGCTGCGTCTGGAATGGCTATGCTAGACGAGTGCCAACAAGTGGTTGTGGAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGCAAATGCTGCGTCTGGAATGGCTATGCTAGACGAGTGCCAACAAGTGGTTGTGGAG  60

Query  61   AAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTAACTCCCTCCCTGCCGATGAG  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   AAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTAACTCCCTCCCTGCCGATGAG  120

Query  121  TGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATGAAAATTGCCAGAAAAGCAAG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  TGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATGAAAATTGCCAGAAAAGCAAG  180

Query  181  ATTTTCTTTATTGCTTGGTCACCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ATTTTCTTTATTGCTTGGTCACCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCA  240

Query  241  AGCTCAAAGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTGCAAGCAACG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  AGCTCAAAGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTGCAAGCAACG  300

Query  301  GATCCCAGTGAAATGAGCTTTGACATTATAAAGTCACGAGCACTTTGA  348
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  GATCCCAGTGAAATGAGCTTTGACATTATAAAGTCACGAGCACTTTGA  348


>Nbe.v1.1.chr17g29780
Length=414

 Score = 481 bits (260),  Expect = 3e-135
 Identities = 292/308 (95%), Gaps = 0/308 (0%)
 Strand=Plus/Plus

Query  41   GCCAACAAGTGGTTGTGGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTA  100
            ||||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| |
Sbjct  107  GCCAACAAGTGGTTGTGGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCA  166

Query  101  ACTCCCTCCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATG  160
            |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct  167  ACTCTCTGCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTG  226

Query  161  AAAATTGCCAGAAAAGCAAGATTTTCTTTATTGCTTGGTCACCTGACACATCAAAGGTGA  220
            |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct  227  AAAATTGCCAGAAAAGCAAGATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTGA  286

Query  221  GGATGAAGATGGTTTACGCAAGCTCAAAGGATAGATTCAAGAGAGAATTGGATGGAATTC  280
            ||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||
Sbjct  287  GGATGAAGATGGTTTACGCGAGTTCAAAGGATAGATTCAAGAGAGAACTGGATGGAATTC  346

Query  281  AAGTTGAATTGCAAGCAACGGATCCCAGTGAAATGAGCTTTGACATTATAAAGTCACGAG  340
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  347  AAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGAGCTTTGACATTATAAAGTCACGAG  406

Query  341  CACTTTGA  348
            ||||||||
Sbjct  407  CACTTTGA  414



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 23690096173


  Database: Nbe_v1.1_cds Blast Database
    Posted date:  Dec 5, 2024  9:40 AM
  Number of letters in database: 75,458,201
  Number of sequences in database:  84,570



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5