BLASTN 2.15.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Nbe_v1.1_scf Genome Blast Database 1,666 sequences; 2,926,155,461 total letters Query= Nbe.v1.1.chr17g29780 Length=414 Score E Sequences producing significant alignments: (Bits) Value Nbe.v1.1.chr17 486 3e-135 Nbe.v1.1.chr07 401 1e-109 Nbe.v1.1.chr13 313 6e-83 Nbe.v1.1.chr03 178 2e-42 >Nbe.v1.1.chr17 Length=184452736 Score = 486 bits (263), Expect = 3e-135 Identities = 263/263 (100%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 3 GGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAATT 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85303335 GGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAATT 85303394 Query 63 AAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTTGT 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85303395 AAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTTGT 85303454 Query 123 GGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCCGA 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85303455 GGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCCGA 85303514 Query 183 TGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAAAG 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85303515 TGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAAAG 85303574 Query 243 CAAGATTTTCTTCATTGCTTGGT 265 ||||||||||||||||||||||| Sbjct 85303575 CAAGATTTTCTTCATTGCTTGGT 85303597 Score = 281 bits (152), Expect = 2e-73 Identities = 152/152 (100%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 263 GGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCGAGTTCAAAGGATAGAT 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85303827 GGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCGAGTTCAAAGGATAGAT 85303886 Query 323 TCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGA 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85303887 TCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGA 85303946 Query 383 GCTTTGACATTATAAAGTCACGAGCACTTTGA 414 |||||||||||||||||||||||||||||||| Sbjct 85303947 GCTTTGACATTATAAAGTCACGAGCACTTTGA 85303978 >Nbe.v1.1.chr07 Length=141754421 Score = 401 bits (217), Expect = 1e-109 Identities = 248/263 (94%), Gaps = 1/263 (0%) Strand=Plus/Plus Query 3 GGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAATT 62 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 75405752 GGCAAATGCTGCGTCTGGAATGGCTATGCTAGACGAGTGTAAGCTGAAGTTCTTGGAATT 75405811 Query 63 AAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTTGT 122 ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| Sbjct 75405812 AAAAGCAAAGAGAAACTTCAGATTCATAGTATTCAA-ATTGAAGGCCAACAAGTGGTTGT 75405870 Query 123 GGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCCGA 182 ||||||||| || |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct 75405871 GGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTAACTCCCTCCCTGCCGA 75405930 Query 183 TGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAAAG 242 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 75405931 TGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATGAAAATTGCCAGAAAAG 75405990 Query 243 CAAGATTTTCTTCATTGCTTGGT 265 |||||||||||| |||||||||| Sbjct 75405991 CAAGATTTTCTTTATTGCTTGGT 75406013 Score = 254 bits (137), Expect = 4e-65 Identities = 147/152 (97%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 263 GGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCGAGTTCAAAGGATAGAT 322 |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 75406129 GGTCACCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCAAGCTCAAAGGATAGAT 75406188 Query 323 TCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGA 382 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 75406189 TCAAGAGAGAATTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAAATGA 75406248 Query 383 GCTTTGACATTATAAAGTCACGAGCACTTTGA 414 |||||||||||||||||||||||||||||||| Sbjct 75406249 GCTTTGACATTATAAAGTCACGAGCACTTTGA 75406280 >Nbe.v1.1.chr13 Length=141292916 Score = 313 bits (169), Expect = 6e-83 Identities = 235/268 (88%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 3 GGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAATT 62 ||| ||||||| ||||||||||| || | ||| || |||||||| || ||||||||||| Sbjct 62868555 GGCGAATGCTGTTTCTGGAATGGCAGTACAAGATGAATGTAAGCTAAAATTCTTGGAATT 62868496 Query 63 AAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTTGT 122 ||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||| || Sbjct 62868495 AAAAGCAAAGAGAAACTACAGGTTCATTATTTTCAAGATTGATGGCCAGGAAGTGGTGGT 62868436 Query 123 GGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCCGA 182 |||||||| || | |||||||||| |||||| || ||| | |||||||||||||| || Sbjct 62868435 AGAGAAGCTTGGCAGCCCTGAAGAAAGCTATGAAGATTTCTCTAACTCTCTGCCTGCAGA 62868376 Query 183 TGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAAAG 242 ||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 62868375 TGAATGTCGCTATGCTGTCTTTGATTTAGACTTCATAACTAATGAAAATTGCCAGAAAAG 62868316 Query 243 CAAGATTTTCTTCATTGCTTGGTCTCCT 270 ||||||||||||||||||||||| |||| Sbjct 62868315 CAAGATTTTCTTCATTGCTTGGTATCCT 62868288 Score = 193 bits (104), Expect = 8e-47 Identities = 137/153 (90%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 263 GGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTTTACGCGAGTTCAAAGGATAGAT 322 |||| || || ||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct 62867746 GGTCACCAGAAACATCAAGGGTGAGGATGAAGATGGTGTACGCGAGCTCAAAGGATAGAT 62867687 Query 323 TCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGA 382 |||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||| |||| Sbjct 62867686 TCAAGAGAGAACTGGACGGAATTCAAGTTGAGTTGCAAGCAACAGATCCTAGTGAAATGA 62867627 Query 383 GCTTTGACATTATAAAGTCACGAGCACT-TTGA 414 ||||||||||| |||| ||||||| || |||| Sbjct 62867626 GCTTTGACATTGTAAAAGCACGAGC-CTATTGA 62867595 >Nbe.v1.1.chr03 Length=132617964 Score = 178 bits (96), Expect = 2e-42 Identities = 120/132 (91%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 139 CCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCCGATGAGTGCCGCTATGCT 198 |||||||||| |||||| || ||| | |||||||||||||| ||||| || ||||||||| Sbjct 86984950 CCTGAAGAAAGCTATGAAGATTTCTCTAACTCTCTGCCTGCAGATGAATGTCGCTATGCT 86984891 Query 199 GTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAAAGCAAGATTTTCTTCATT 258 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 86984890 GTCTTTGATTTAGACTTCATAACTAATGAAAATTGCCAGAAAAGCAAGATTTTCTTCATT 86984831 Query 259 GCTTGGTCTCCT 270 |||| || |||| Sbjct 86984830 GCTTTGTATCCT 86984819 Score = 130 bits (70), Expect = 6e-28 Identities = 112/133 (84%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 3 GGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAATT 62 ||| ||||||| ||||||||||| || | ||| || |||||| | || ||||||||||| Sbjct 86989704 GGCGAATGCTGTCTCTGGAATGGCAGTACGAGATGAATGTAAGTTAAAATTCTTGGAATT 86989645 Query 63 AAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTTGT 122 ||||||||||||||||||||||||||| | ||||||||||| |||| ||||||| || Sbjct 86989644 AAAAGCAAAGAGAAACTACAGGTTCATTATTTTCAAGATTGATGGCCGGGAAGTGGTGGT 86989585 Query 123 GGAGAAGCTGGGT 135 |||||||| ||| Sbjct 86989584 AGAGAAGCTTGGT 86989572 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 1126551251595 Database: Nbe_v1.1_scf Genome Blast Database Posted date: Dec 5, 2024 9:41 AM Number of letters in database: 2,926,155,461 Number of sequences in database: 1,666 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5