BLASTN 2.15.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Nbe_v1.1_cds Blast Database
           84,570 sequences; 75,458,201 total letters



Query= Nbe.v1.1.chr17g29780

Length=414
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Nbe.v1.1.chr17g29780                                                  765     0.0   
Nbe.v1.1.chr07g16430                                                  481     4e-135


>Nbe.v1.1.chr17g29780
Length=414

 Score = 765 bits (414),  Expect = 0.0
 Identities = 414/414 (100%), Gaps = 0/414 (0%)
 Strand=Plus/Plus

Query  1    ATGGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAA  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGCAAATGCTGCGTCTGGAATGGCTGTGCTAGACGAGTGTAAGCTGAAGTTCTTGGAA  60

Query  61   TTAAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTT  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   TTAAAAGCAAAGAGAAACTACAGGTTCATAGTATTCAAGATTGAAGGCCAACAAGTGGTT  120

Query  121  GTGGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  GTGGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCAACTCTCTGCCTGCC  180

Query  181  GATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  GATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTGAAAATTGCCAGAAA  240

Query  241  AGCAAGATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTT  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  AGCAAGATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTGAGGATGAAGATGGTT  300

Query  301  TACGCGAGTTCAAAGGATAGATTCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAA  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  TACGCGAGTTCAAAGGATAGATTCAAGAGAGAACTGGATGGAATTCAAGTTGAATTGCAA  360

Query  361  GCAACGGATCCCAGTGAGATGAGCTTTGACATTATAAAGTCACGAGCACTTTGA  414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  GCAACGGATCCCAGTGAGATGAGCTTTGACATTATAAAGTCACGAGCACTTTGA  414


>Nbe.v1.1.chr07g16430
Length=348

 Score = 481 bits (260),  Expect = 4e-135
 Identities = 292/308 (95%), Gaps = 0/308 (0%)
 Strand=Plus/Plus

Query  107  GCCAACAAGTGGTTGTGGAGAAGCTGGGTAATCCTGAAGAAAACTATGACGACTTCACCA  166
            ||||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| |
Sbjct  41   GCCAACAAGTGGTTGTGGAGAAGCTTGGAAATCCTGAGGAAAACTATGAGGATTTCACTA  100

Query  167  ACTCTCTGCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTCATAACTACTG  226
            |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct  101  ACTCCCTCCCTGCCGATGAGTGCCGCTATGCTGTCTTTGATTTCGACTTTATAACTAATG  160

Query  227  AAAATTGCCAGAAAAGCAAGATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTGA  286
            |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct  161  AAAATTGCCAGAAAAGCAAGATTTTCTTTATTGCTTGGTCACCTGACACATCAAAGGTGA  220

Query  287  GGATGAAGATGGTTTACGCGAGTTCAAAGGATAGATTCAAGAGAGAACTGGATGGAATTC  346
            ||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||
Sbjct  221  GGATGAAGATGGTTTACGCAAGCTCAAAGGATAGATTCAAGAGAGAATTGGATGGAATTC  280

Query  347  AAGTTGAATTGCAAGCAACGGATCCCAGTGAGATGAGCTTTGACATTATAAAGTCACGAG  406
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  281  AAGTTGAATTGCAAGCAACGGATCCCAGTGAAATGAGCTTTGACATTATAAAGTCACGAG  340

Query  407  CACTTTGA  414
            ||||||||
Sbjct  341  CACTTTGA  348



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 28530796939


  Database: Nbe_v1.1_cds Blast Database
    Posted date:  Dec 5, 2024  9:40 AM
  Number of letters in database: 75,458,201
  Number of sequences in database:  84,570



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5