BLASTN 2.15.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Nbe_v1.1_scf Genome Blast Database 1,666 sequences; 2,926,155,461 total letters Query= Nbe.v1.1.chr09g11380 Length=366 Score E Sequences producing significant alignments: (Bits) Value Nbe.v1.1.chr09 676 0.0 Nbe.v1.1.chr08 427 2e-117 Nbe.v1.1.chr05 424 2e-116 Nbe.v1.1.chr12 416 4e-114 Nbe.v1.1.chr14 405 8e-111 >Nbe.v1.1.chr09 Length=145834573 Score = 676 bits (366), Expect = 0.0 Identities = 366/366 (100%), Gaps = 0/366 (0%) Strand=Plus/Plus Query 1 ATGGGTATTACAGAACCATACACAATGAATAGTAGGCCTATGGTGGTCAAAGTGTGGTCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110404744 ATGGGTATTACAGAACCATACACAATGAATAGTAGGCCTATGGTGGTCAAAGTGTGGTCT 110404803 Query 61 GCAAGTTTTGGTTTTGCAAATGAGGTACTGAAAACTATACCTCTATGGATCCAGTCGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110404804 GCAAGTTTTGGTTTTGCAAATGAGGTACTGAAAACTATACCTCTATGGATCCAGTCGCCA 110404863 Query 121 AAGTTGCCGTTAAGCTGTTGGGAGGATGATTCATTAAGCAGAATTGGAAGCACTTTGGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110404864 AAGTTGCCGTTAAGCTGTTGGGAGGATGATTCATTAAGCAGAATTGGAAGCACTTTGGGA 110404923 Query 181 ATTCCTATATATGTAGATGCGTGTACAACAAGAGTTGAACGTATTTCGTATGTTCGAATT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110404924 ATTCCTATATATGTAGATGCGTGTACAACAAGAGTTGAACGTATTTCGTATGTTCGAATT 110404983 Query 241 CTAGTAGAAATGGATGTGATAGAGCCATTATTAAAACAAATCAAGGTTGAAGATCCTAAT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110404984 CTAGTAGAAATGGATGTGATAGAGCCATTATTAAAACAAATCAAGGTTGAAGATCCTAAT 110405043 Query 301 GGGAGAGAATTTGAACAAGAGGTGTGGTATGACTGGTTGCCACAATATTGTACAAGATAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110405044 GGGAGAGAATTTGAACAAGAGGTGTGGTATGACTGGTTGCCACAATATTGTACAAGATAT 110405103 Query 361 TTGTAA 366 |||||| Sbjct 110405104 TTGTAA 110405109 >Nbe.v1.1.chr08 Length=143789764 Score = 427 bits (231), Expect = 2e-117 Identities = 311/351 (89%), Gaps = 0/351 (0%) Strand=Plus/Minus Query 16 CCATACACAATGAATAGTAGGCCTATGGTGGTCAAAGTGTGGTCTGCAAGTTTTGGTTTT 75 |||||||| ||||| ||||||| | |||||||||||| ||||||||||||||||| |||| Sbjct 1046482 CCATACACGATGAACAGTAGGCATGTGGTGGTCAAAGCGTGGTCTGCAAGTTTTGATTTT 1046423 Query 76 GCAAATGAGGTACTGAAAACTATACCTCTATGGATCCAGTCGCCAAAGTTGCCGTTAAGC 135 ||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||| Sbjct 1046422 GCAAATGAGGTACTGAAAACTATACCTTTATGGATCCAATTACCAAAGTTGCTGTTAAGT 1046363 Query 136 TGTTGGGAGGATGATTCATTAAGCAGAATTGGAAGCACTTTGGGAATTCCTATATATGTA 195 |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| | Sbjct 1046362 TGTTGGGAGGATAATTCTCTAAGCAGAACTGGAAGCACTTTGGGAATTCCTATATATGCA 1046303 Query 196 GATGCGTGTACAACAAGAGTTGAACGTATTTCGTATGTTCGAATTCTAGTAGAAATGGAT 255 ||| |||||||||||| || ||||||||||| |||| ||||||||| ||||||||||| Sbjct 1046302 GATACGTGTACAACAAAAGCGGAACGTATTTCATATGCTCGAATTCTGATAGAAATGGAT 1046243 Query 256 GTGATAGAGCCATTATTAAAACAAATCAAGGTTGAAGATCCTAATGGGAGAGAATTTGAA 315 |||| | |||||||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct 1046242 GTGACAAAGCCATTACCAATGCAAATCAAGGTTGAAGATCCAAATGGGAGTGAATTTGAA 1046183 Query 316 CAAGAGGTGTGGTATGACTGGTTGCCACAATATTGTACAAGATATTTGTAA 366 || ||||| ||||||||||||||||| ||||| ||||||| || |||| || Sbjct 1046182 CAGGAGGTATGGTATGACTGGTTGCCTCAATACTGTACAAAATGTTTGCAA 1046132 >Nbe.v1.1.chr05 Length=150118632 Score = 424 bits (229), Expect = 2e-116 Identities = 299/333 (90%), Gaps = 3/333 (1%) Strand=Plus/Plus Query 11 CAGAACCATACACAATGAATAGTAGGCCTATGGTGGTCAAAGTGTGGT-CTGCAAGTTTT 69 ||| ||||||||| ||||||||||||| | ||||||||||||| |||| ||| |||||| Sbjct 26892969 CAGGACCATACACGATGAATAGTAGGCATGTGGTGGTCAAAGTATGGTTCTG--AGTTTT 26893026 Query 70 GGTTTTGCAAATGAGGTACTGAAAACTATACCTCTATGGATCCAGTCGCCAAAGTTGCCG 129 | |||||||||||||||||||||||||||||||||||||||| ||| ||||||| | | Sbjct 26893027 GATTTTGCAAATGAGGTACTGAAAACTATACCTCTATGGATCTAGTTGCCAAAGCTATTG 26893086 Query 130 TTAAGCTGTTGGGAGGATGATTCATTAAGCAGAATTGGAAGCACTTTGGGAATTCCTATA 189 |||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 26893087 TTAAGCTGTTTAGAGGATGATCCATTAAGCAGAATTGGAAGCACTTTGGGAATTTCTATA 26893146 Query 190 TATGTAGATGCGTGTACAACAAGAGTTGAACGTATTTCGTATGTTCGAATTCTAGTAGAA 249 |||| |||||||||||||||||||||||||||||||||||||| | || |||||||| || Sbjct 26893147 TATGCAGATGCGTGTACAACAAGAGTTGAACGTATTTCGTATGCTTGAGTTCTAGTAAAA 26893206 Query 250 ATGGATGTGATAGAGCCATTATTAAAACAAATCAAGGTTGAAGATCCTAATGGGAGAGAA 309 |||||||||| | || ||||| |||| |||| |||||||||||||||||||||||| | Sbjct 26893207 ATGGATGTGACAAAGTCATTACCAAAAAAAATTAAGGTTGAAGATCCTAATGGGAGAATA 26893266 Query 310 TTTGAACAAGAGGTGTGGTATGACTGGTTGCCA 342 |||||||||||||| |||||||||||||||||| Sbjct 26893267 TTTGAACAAGAGGTATGGTATGACTGGTTGCCA 26893299 >Nbe.v1.1.chr12 Length=144244529 Score = 416 bits (225), Expect = 4e-114 Identities = 310/352 (88%), Gaps = 1/352 (0%) Strand=Plus/Minus Query 15 ACCATACACAATGAATAGTAGGCCTATGGTGGTCAAAGTGTGGTCTGCAAGTTTTGGTTT 74 ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||| Sbjct 40747357 ACCATACACGATGAATAGTAGGCCTGTGGTGGTCAAAGCGTGGTCTGCAAGTTTTGATTT 40747298 Query 75 TGCAAATGAGGTACTGAAAACTATACCTCTATGGATCCAGTCGCCAAAGTTGCCGTTAAG 134 ||||||||||||||||||||||||||||||||| || || | ||||||||| |||||||| Sbjct 40747297 TGCAAATGAGGTACTGAAAACTATACCTCTATGAATACAATTGCCAAAGTTTCCGTTAAG 40747238 Query 135 CTGTTGGGAGGATGATTCATTAAGCAGAATTGGAAGCACTTTGGGAATTCCTATATATGT 194 || ||||||||||||||| ||||| |||||||||||| || |||||||||||||||| Sbjct 40747237 CTCTTGGGAGGATGATTCTCTAAGCTAAATTGGAAGCACCTTTGGAATTCCTATATATGC 40747178 Query 195 AGATGCGTGTACAACAAGAGTTGAACGTATTTCGTATGTTCGAATTCTAGTAGAAATGGA 254 |||||| |||||||||||||| |||||||||| ||||| | ||||||| |||||||||| Sbjct 40747177 AGATGCATGTACAACAAGAGTGGAACGTATTTTGTATGCTTGAATTCTGATAGAAATGGA 40747118 Query 255 TGTGATAGAGCCATTATTAAAACAAATCAAGGTTGAAGATCCTAATGGGAGAGAATTTGA 314 ||||||| | |||||| ||| |||||||||||| ||||||| | |||||| |||||||| Sbjct 40747117 TGTGATAAATCCATTACCAAA-CAAATCAAGGTTAAAGATCCAAGTGGGAGTGAATTTGA 40747059 Query 315 ACAAGAGGTGTGGTATGACTGGTTGCCACAATATTGTACAAGATATTTGTAA 366 | ||||||||||||||| ||||||| |||||||||||| || |||| || Sbjct 40747058 ATAAGAGGTGTGGTATGGATGGTTGCTTTAATATTGTACAAAATGTTTGCAA 40747007 >Nbe.v1.1.chr14 Length=133556305 Score = 405 bits (219), Expect = 8e-111 Identities = 300/340 (88%), Gaps = 1/340 (0%) Strand=Plus/Minus Query 19 TACACAATGAATAGTAGGCCTATGGTGGTCAAAGTGTGGTCTGCAAGTTTTGGTTTTGCA 78 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 103934661 TACACGATGAACAGTAGGCCTATGGTGGTCAAAGTGTGGTCTGCGAGTTTTGATTTTGCA 103934602 Query 79 AATGAGGTACTGAAAACTATACCTCTATGGATCCAGTCGCCAAAGTTGCCGTTAAGCTGT 138 ||||||||||||||||||||||||||||||||||| | |||||| ||||||||| | ||| Sbjct 103934601 AATGAGGTACTGAAAACTATACCTCTATGGATCCAATTGCCAAATTTGCCGTTACGTTGT 103934542 Query 139 TGGGAGGATGATTCATTAAGCAGAATTGGAAGCACTTTGGGAATTCCTATATATGTAGAT 198 ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| || Sbjct 103934541 TGGGAGGATGATTCACTAAGCAGAATTAGAAGCACTTTGGGAATACCTATATATGCAGGC 103934482 Query 199 GCGTGTACAACAAGAGTTGAACGTATTTCGTATGTTCGAATTCTAGTAGAAATGGATGTG 258 ||||||||||| | | | ||||||||||| |||| ||||||||| |||||||||||||| Sbjct 103934481 GCGTGTACAACTAAACTGGAACGTATTTCATATGCTCGAATTCTGATAGAAATGGATGTG 103934422 Query 259 ATAGAGCCATTATTAAAACAAATCAAGGTTGAAGATCCTAATGGGAGAGAATTTGAACAA 318 | | |||||||| ||| ||||| |||||| ||||||| ||||||| |||||||||||| Sbjct 103934421 ACAAAGCCATTACCAAAGCAAATAAAGGTTAAAGATCCAAATGGGAATGAATTTGAACAA 103934362 Query 319 GAGGTGTGGTATGACTGGTTGCCACAATATTGTACAAGAT 358 ||||| || ||||||||||||| ||||||| || || || Sbjct 103934361 GAGGTATGA-ATGACTGGTTGCCTCAATATTTTAAAAAAT 103934323 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 986098108539 Database: Nbe_v1.1_scf Genome Blast Database Posted date: Dec 5, 2024 9:41 AM Number of letters in database: 2,926,155,461 Number of sequences in database: 1,666 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5